Premium
Crystallization Mechanisms Applied to Understand the Crystal Formation of Rotaxanes
Author(s) -
Orlando Tainára,
Salbego Paulo R. S.,
Farias Fellipe F. S.,
Weimer Gustavo H.,
Copetti João P. P.,
Bonacorso Helio G.,
Zanatta Nilo,
Hoerner Manfredo,
Berná José,
Martins Marcos A. P.
Publication year - 2019
Publication title -
european journal of organic chemistry
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.825
H-Index - 155
eISSN - 1099-0690
pISSN - 1434-193X
DOI - 10.1002/ejoc.201801870
Subject(s) - rotaxane , crystallization , supramolecular chemistry , chemistry , molecule , nucleation , crystallography , crystal engineering , chemical physics , crystal structure , organic chemistry
The present study discusses the crystalline packing formation of several [2]rotaxanes with Leigh‐type tetralactam macrocycle bearing different threads. The presence of solvent molecules in some structures are also addressed to shed some light on this matter. Additionally, the degree of similarity between supramolecular structures of rotaxanes was discussed using similarity indices. For this, new descriptors and crystallization mechanisms, which were proposed in terms of contact area and stabilization energy, were carried out to evaluate the rotaxane molecules. It was possible to observe similar general stages of crystallization dominated by the formation of 1D‐blocks and, in fewer cases, by dimers in the first stage of nucleation. The preference for the formation of 1D nuclei resides in the large contact area and complementarity involved in the large set of interactions between the rotaxanes at the earliest stages of crystallization. In this context, it was possible to propose when solvent molecules are trapped between the rotaxanes during crystal formation. Therefore, a unique example of a rotaxane whose topology favored the entrapment of water molecules between rotaxanes during the first stage of the crystallization process is presented. Crystallization mechanisms showed to be a valuable asset in the supramolecular investigation of rotaxanes in the crystalline state.