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VSMP for Modeling the Biodegradability of Substituted Benzenes Based on Electrotopological State Indices for Atom Types
Author(s) -
ShuShen Liu,
DaQiang Yin,
ShiHai Cui,
LianSheng Wang
Publication year - 2005
Publication title -
chinese journal of chemistry
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.28
H-Index - 41
eISSN - 1614-7065
pISSN - 1001-604X
DOI - 10.1002/cjoc.200590622
Subject(s) - chemistry , correlation coefficient , biodegradation , quantitative structure–activity relationship , atom (system on chip) , mean squared error , biological system , state (computer science) , computational chemistry , stereochemistry , organic chemistry , statistics , algorithm , mathematics , computer science , biology , embedded system
The electrotopological state (E‐state) index was employed to characterize the structures of 51 substituted benzenes. Eleven E‐state indices of the compounds were calculated by the computer program developed in our laboratory. The method for variable selection and modeling based on prediction (VSMP) was used to select an optimal combination of the variables from 11 E‐state descriptors. Then the optimal descriptors were employed to model the relationship between the relative biodegradability of the substituted benzenes and their molecular structures. A novel 5‐descriptor linear model was developed and the model has a high quality with the correlation coefficient and the root mean square error in estimation step being 0.9378 and 0.35, respectively, and these in leave‐one‐out cross‐validation procedure being 0.9210 and 0.39, respectively.
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