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Exonuclease and Nicking Endonuclease‐Assisted Amplified Electrochemical Detection of Coralyne
Author(s) -
Wang Jue,
Yu Jing,
Zhou Xiaoyu,
Miao Peng
Publication year - 2017
Publication title -
chemelectrochem
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.182
H-Index - 59
ISSN - 2196-0216
DOI - 10.1002/celc.201700400
Subject(s) - exonuclease iii , exonuclease , endonuclease , dna , detection limit , electrode , deoxyribozyme , cleavage (geology) , combinatorial chemistry , biosensor , chemistry , electrochemistry , recognition sequence , hybridization probe , restriction enzyme , molecular beacon , analyte , linear range , biophysics , polymerase , biology , biochemistry , oligonucleotide , chromatography , gene , escherichia coli , paleontology , fracture (geology)
Based on the catalysis of exonuclease I (Exo I) and nicking endonuclease (NEase), a novel electrochemical biosensor for the detection of coralyne is fabricated in this work. Specifically, DNA probe 1 can be protected from Exo I‐catalyzed digestion upon interacting with coralyne, the most representative homo‐adenine binding molecule. Subsequently, DNA probe 1 can further hybridize with a pendant sequence on top of the DNA tetrahedron, which is previously modified on the gold electrode surface. As the formed duplex contains the recognition site of Nb.BssSI, a type of NEase, the pendant sequence is thus cleaved, releasing the electrochemical probe on the 5’‐terminus from the electrode surface. DNA probe 1 is also released, which could then initiate the subsequent cycles of NEase‐catalyzed cleavage and amplify the declined electrochemical signals. We can determine coralyne in a linear range from 0.1 to 100 nM with the detection limit of 0.07 nM by using the proposed method. Experiments in real samples also demonstrate good results, showing excellent practical utility of this method. Moreover, it could be extended to assay other analytes by modifying certain DNA sequences.