Photophysics of Structurally Modified Flavin Derivatives in the Blue‐Light Photoreceptor YtvA: A Combined Experimental and Theoretical Study

The light‐induced processes of two flavin mononucleotide derivatives (1‐ and 5‐deaza flavin mononucleotide, 1DFMN and 5DFMN), incorporated into the LOV domain of YtvA protein from Bacillus subtilis , were studied by a combination of experimental and computational methods. Quantum mechanics/molecular mechanics (QM/MM) calculations were carried out in which the QM part was treated by density functional theory (DFT) using the B3LYP functional for geometry optimizations and the DFT/MRCI method for spectroscopic properties, whereas the MM part was described by the CHARMM force field. 1DFMN is incorporated into the protein binding site, yielding a red‐shifted absorption band ( λ max =530 nm compared to YtvA wild‐type λ max =445 nm), but does not undergo any LOV‐typical photoreactions such as triplet and photoadduct formation. QM/MM computations confirmed the absence of a channel for triplet formation and located a radiation‐free channel (through an S 1 /S 0 conical intersection) along a hydrogen transfer path that might allow for fast deactivation. By contrast, 5DFMN‐YtvA‐LOV shows a blue‐shifted absorption ( λ max =410 nm) and undergoes similar photochemical processes to FMN in the wild‐type protein, both with regard to the photophysics and the formation of a photoadduct with a flavin‐cysteinyl covalent bond. The QM/MM calculations predict a mechanism that involves hydrogen transfer in the T 1 state, followed by intersystem crossing and adduct formation in the S 0 state for the forward reaction. Experimentally, in contrast to wild‐type YtvA, dark‐state recovery in 5DFMN‐YtvA‐LOV is not thermally driven but can only be accomplished after absorption of a second photon by the photoadduct, again via the triplet state. The QM/MM calculations suggest a photochemical mechanism for dark‐state recovery that is accessible only for the adduct with a C4aS bond but not for alternative adducts with a C5S bond.