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Probing the active site of MIO‐dependent aminomutases, key catalysts in the biosynthesis of β‐amino acids incorporated in secondary metabolites
Author(s) -
Cooke Heather A.,
Bruner Steven D.
Publication year - 2010
Publication title -
biopolymers
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.556
H-Index - 125
eISSN - 1097-0282
pISSN - 0006-3525
DOI - 10.1002/bip.21500
Subject(s) - chemistry , active site , tyrosine , stereochemistry , mutagenesis , biosynthesis , enzyme , amino acid , biochemistry , site directed mutagenesis , substrate (aquarium) , mutant , oceanography , gene , geology
The tyrosine aminomutase Sg TAM produces ( S )‐ß‐tyrosine from L ‐tyrosine in the biosynthesis of the enediyne antitumor antibiotic C‐1027. This conversion is promoted by the methylideneimidazole‐5‐one (MIO) prosthetic group. MIO was first identified in the homologous family of ammonia lyases, which deaminate aromatic amino acids to form α,ß‐unsaturated carboxylates. Studies of substrate specificity have been described for lyases but there have been limited reports in altering the substrate specificity of aminomutases. Furthermore, it remains unclear as to what structural properties are responsible for catalyzing the presumed readdition of the amino group into the α,ß‐unsaturated intermediates to form ß‐amino acids. Attempts to elucidate specificity and mechanistic determinants of Sg TAM have also proved to be difficult as it is recalcitrant to perturbations to the active site via mutagenesis. An X‐ray cocrystal structure of the Sg TAM mutant of the catalytic base with L ‐tyrosine verified important substrate binding residues as well as the enzymatic base. Further mutagenesis revealed that removal of these crucial interactions renders the enzyme inactive. Proposed structural determinants for mutase activity probed via mutagenesis, time‐point assays and X‐ray crystallography revealed a complicated role for these residues in maintaining key quaternary structure properties that aid in catalysis. © 2010 Wiley Periodicals, Inc. Biopolymers 93: 802–810, 2010.