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Location analysis of DNA‐bound proteins at the whole‐genome level: untangling transcriptional regulatory networks
Author(s) -
Nal Béatrice,
Mohr Elodie,
Ferrier Pierre
Publication year - 2001
Publication title -
bioessays
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.175
H-Index - 184
eISSN - 1521-1878
pISSN - 0265-9247
DOI - 10.1002/bies.1066
Subject(s) - biology , chromatin immunoprecipitation , computational biology , tiling array , genetics , gene regulatory network , gene , genomics , functional genomics , transcription factor , regulation of gene expression , chromatin , genome , dna microarray , dna sequencing , gene expression , promoter
In this post‐sequencing era, geneticists can focus on functional genomics on a much larger scale than ever before. One goal is the discovery and elucidation of the intricate genetic networks that co‐ordinate transcriptional activation in different regulatory circuitries. High‐throughput gene expression measurement using DNA arrays has thus become routine strategy. This approach, however, does not directly identify gene loci that belong to the same regulatory group; e.g., those that are bound by a common (set of) transcription factor(s). Working in yeast, two groups have recently published an elegant method that could circumvent this problem, by combining chromatin immunoprecipitation and DNA microarrays.(1,2) The method is likely to provide a powerful tool for the dissection of global regulatory networks in eukaryotic cells. BioEssays 23:473–476, 2001. © 2001 John Wiley & Sons, Inc.