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Local and Global Dynamics in Intrinsically Disordered Synuclein
Author(s) -
RezaeiGhaleh Nasrollah,
Parigi Giacomo,
Soranno Andrea,
Holla Andrea,
Becker Stefan,
Schuler Benjamin,
Luchinat Claudio,
Zweckstetter Markus
Publication year - 2018
Publication title -
angewandte chemie international edition
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 5.831
H-Index - 550
eISSN - 1521-3773
pISSN - 1433-7851
DOI - 10.1002/anie.201808172
Subject(s) - intrinsically disordered proteins , molecular dynamics , dihedral angle , ramachandran plot , dynamics (music) , protein dynamics , fluorescence correlation spectroscopy , chemical physics , chemistry , biophysics , physics , nuclear magnetic resonance , crystallography , protein structure , fluorescence , computational chemistry , biology , molecule , hydrogen bond , organic chemistry , acoustics , quantum mechanics
Intrinsically disordered proteins (IDPs) experience a diverse spectrum of motions that are difficult to characterize with a single experimental technique. Herein we combine high‐ and low‐field nuclear spin relaxation, nanosecond fluorescence correlation spectroscopy (nsFCS), and long molecular dynamics simulations of alpha‐synuclein, an IDP involved in Parkinson disease, to obtain a comprehensive picture of its conformational dynamics. The combined analysis shows that fast motions below 2 ns caused by local dihedral angle fluctuations and conformational sampling within and between Ramachandran substates decorrelate most of the backbone N−H orientational memory. However, slow motions with correlation times of up to ca. 13 ns from segmental dynamics are present throughout the alpha‐synuclein chain, in particular in its C‐terminal domain, and global chain reconfiguration occurs on a timescale of ca. 60 ns. Our study demonstrates a powerful strategy to determine residue‐specific protein dynamics in IDPs at different time and length scales.