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Rapid Determination of Fast Protein Dynamics from NMR Chemical Exchange Saturation Transfer Data
Author(s) -
Gu Yina,
Hansen Alexandar L.,
Peng Yu,
Brüschweiler Rafael
Publication year - 2016
Publication title -
angewandte chemie international edition
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 5.831
H-Index - 550
eISSN - 1521-3773
pISSN - 1433-7851
DOI - 10.1002/anie.201511711
Subject(s) - millisecond , protein dynamics , chemistry , picosecond , relaxation (psychology) , biological system , magnetization transfer , saturation (graph theory) , dynamics (music) , analytical chemistry (journal) , molecular dynamics , chemical physics , nuclear magnetic resonance , physics , computational chemistry , chromatography , medicine , psychology , social psychology , laser , mathematics , radiology , combinatorics , astronomy , acoustics , magnetic resonance imaging , optics , biology
Functional motions of 15 N‐labeled proteins can be monitored by solution NMR spin relaxation experiments over a broad range of timescales. These experiments however typically take of the order of several days to a week per protein. Recently, NMR chemical exchange saturation transfer (CEST) experiments have emerged to probe slow millisecond motions complementing R 1 ρ and CPMG‐type experiments. CEST also simultaneously reports on site‐specific R 1 and R 2 parameters. It is shown here how CEST‐derived R 1 and R 2 relaxation parameters can be measured within a few hours at an accuracy comparable to traditional relaxation experiments. Using a “lean” version of the model‐free approach S 2 order parameters can be determined that match those from the standard model‐free approach applied to 15 N R 1 , R 2 , and { 1 H}‐ 15 N NOE data. The new methodology, which is demonstrated for ubiquitin and arginine kinase (42 kDa), should serve as an effective screening tool of protein dynamics from picosecond‐to‐millisecond timescales.