Premium
Kinetics of the Antibody Recognition Site in the Third IgG‐Binding Domain of Protein G
Author(s) -
Pratihar Supriya,
Sabo T. Michael,
Ban David,
Fenwick R. Bryn,
Becker Stefan,
Salvatella Xavier,
Griesinger Christian,
Lee Donghan
Publication year - 2016
Publication title -
angewandte chemie
Language(s) - English
Resource type - Journals
eISSN - 1521-3757
pISSN - 0044-8249
DOI - 10.1002/ange.201603501
Subject(s) - chemistry , kinetics , molecular dynamics , biophysics , protein dynamics , molecular recognition , globular protein , crystallography , physics , computational chemistry , molecule , biology , organic chemistry , quantum mechanics
Protein dynamics occurring on a wide range of timescales play a crucial role in governing protein function. Particularly, motions between the globular rotational correlation time ( τ c ) and 40 μs (supra‐ τ c window), strongly influence molecular recognition. This supra‐ τ c window was previously hidden, owing to a lack of experimental methods. Recently, we have developed a high‐power relaxation dispersion (RD) experiment for measuring kinetics as fast as 4 μs. For the first time, this method, performed under super‐cooled conditions, enabled us to detect a global motion in the first β‐turn of the third IgG‐binding domain of protein G (GB3), which was extrapolated to 371±115 ns at 310 K. Furthermore, the same residues show the plasticity in the model‐free residual dipolar coupling (RDC) order parameters and in an ensemble encoding the supra‐ τ c dynamics. This β‐turn is involved in antibody binding, exhibiting the potential link of the observed supra‐ τ c motion with molecular recognition.
Accelerating Research
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom
Address
John Eccles HouseRobert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom