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Analysis of TPI gene promoter variation in three sub‐Saharan Africa population samples
Author(s) -
Manco Licínio,
Machado Patrícia,
Lopes Dinora,
Nogueira Fátima,
Do Rosário Virgílio E.,
Alonso Pedro L.,
Varandas Luís,
De Jesus Trovoada Maria,
Amorim António,
Arez Ana Paula
Publication year - 2009
Publication title -
american journal of human biology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.559
H-Index - 81
eISSN - 1520-6300
pISSN - 1042-0533
DOI - 10.1002/ajhb.20819
Subject(s) - haplotype , biology , hum , genetics , population , gene , genotype , genetic variation , genetic variability , demography , sociology , art , performance art , art history
Population samples from Angola, Mozambique, and S. Tomé e Príncipe were screened for the TPI gene promoter variants ‐5A→G, ‐8G→A and ‐24T→G. Three haplotypes were identified in the three populations: the haplotype ‐5A‐8G‐24T (average frequency 65.3%) and two less common haplotypes ‐5G‐8G‐24T (average frequency 24.7%) and ‐5G‐8A‐24T (average frequency 10.0%). A population sample from Central Portugal showed the haplotype ‐5A‐8G‐24T in 139 chromosomes and one subject heterozygous for haplotype ‐5G‐8A‐24G. The exact test of sample differentiation among three groups of malaria‐infected individuals classified according to the severity of the disease showed no significant differences. We confirmed TPI gene diversity in sub‐Saharan Africa, but we could not detect any association between TPI promoter variation and a malarial protective effect. Larger scale epidemiological studies are thus required to clarify this putative mechanism of natural host defense against this worldwide public health problem. Am. J. Hum. Biol., 2009. © 2008 Wiley‐Liss, Inc.