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Solid state and solution conformations of a helical peptide with a central gly‐gly segment
Author(s) -
Karle Isabella L.,
Banerjee Arindam,
Bhattacharjya Surajit,
Balaram P.
Publication year - 1996
Publication title -
biopolymers
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.556
H-Index - 125
eISSN - 1097-0282
pISSN - 0006-3525
DOI - 10.1002/(sici)1097-0282(199604)38:4<515::aid-bip7>3.0.co;2-w
Subject(s) - chemistry , crystallography , hydrogen bond , helix (gastropod) , solvation , crystal structure , solvent , stereochemistry , molecule , ecology , organic chemistry , snail , biology
The influence of amino acids with contrasting conformational tendencies on the stereochemistry of oligopeptides has been investigated using an octapeptide Boc‐Leu‐Aib‐Val‐Gly‐Gly‐Leu‐Aib‐Val‐OMe, which contains two helix‐promoting Aib residues and a central helix‐destabilizing Gly‐Gly segment. Single crystal x‐ray diffraction studies reveal that a 3 10 ‐helix is formed up to the penultimate Aib residue, at which point there is a helix reversal in the backbone, reminiscent of a C‐terminal 6 → I hydrogen bond. The curious feature in the crystal is the solvation of the possible 6 → 1 bond by a CH 3 OH molecule, where the OH is inserted between O(3) and N(8) and participates in hydrogen bonds with both. The cell parameters are as follows: space group P2 1 2 1 2 1 , a = 10.649(4) Å, b = 15.694(5) Å, c = 30.181(8) Å, R = 6.7% for 3427 data (| F 0 | > 3σF) observed to 0.9 Å. Nuclear magnetic resonance studies in CDCl 3 using NH group solvent accessibility and nuclear Overhauser effects as probes are consistent with a 3 10 ‐helical conformation. In contrast, in (CD 3 ) 2 SO, unfolding of the central segment results in a multiple β‐turn structure, with β‐turn conformations populated at residues 1–2, 3–4, and 6–7. CD studies in methanol‐2,2,2‐trifluoroethanol (TFE) mixtures also provide evidence for a solvent‐dependent structural transition. Helical conformations are populated in TFE, while type II β‐turn structures are favored in methanol. © 1996 John Wiley & Sons, Inc.