Antigenic epitopes of the photoreceptor synaptic ribbon

The purpose of this study was twofold: 1) to purify and identify a protein containing an epitope recognized by an anti‐synaptic ribbon antibody B16 and 2) to identify and sequence the epitope. B16 recognizes several unrelated proteins in retina immunoblots. Purification and microsequencing of the strongest band (88 kDa) demonstrate 94% identity to aconitase over 111 amino acids. Polyclonal antibodies against aconitase recognize aconitase on Western blots, but not synaptic ribbons in sections. We conclude that although aconitase contains the epitope, aconitase is not the synaptic ribbon protein. The B16 epitope was identified to be 542 DTYQHPPKDS 551 . A synthetic peptide to this sequence absorbs B16 activity in both Western blots and immunohistochemistry studies, whereas partial peptides fail to absorb activity. Additional antibodies against this peptide label synaptic ribbons. When mouse retina were double labeled with B16 and anti‐α‐actinin, B16 was found to label synaptic ribbons in the outer plexiform layer that partially enclosed the α‐actinin label. We have determined the amino acid sequence of the B16 epitope and found that the B16 labeling colocalizes with α‐actinin at the photoreceptor synapse. J Comp Neurol 413:209–218, 1999. © 1999 Wiley‐Liss, Inc.