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The filamentous fungus  Rhizopus delemar  naturally accumulates relatively high amounts of fumarate. Although the culture conditions that increase fumarate yields are well established, the network underlying the accumulation of fumarate is not yet fully understood. We set out to increase the knowledge about fumarate accumulation in  R. delemar . To this end, we combined a transcriptomics and proteomics approach to identify key metabolic pathways involved in fumarate production in  R. delemar , and propose that a substantial part of the fumarate accumulated in  R. delemar  during nitrogen starvation results from the urea cycle due to amino acid catabolism.

Comparative proteomics ofRhizopus delemarATCC 20344 unravels the role of amino acid catabolism in fumarate accumulation