Efficient drawing of RNA secondary structure | Zendy

David Auber | Zendy; Maylis Delest | Zendy; JeanPhilippe Domenger | Zendy; Serge Dulucq | Zendy

AI Assistant Blog Pricing

Home ZAIA Blog

Open Access

Efficient drawing of RNA secondary structure

Author(s) -

David Auber,

Maylis Delest,

JeanPhilippe Domenger,

Serge Dulucq

Publication year - 2006

Publication title -

journal of graph algorithms and applications

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 0.387

H-Index - 38

ISSN - 1526-1719

DOI - 10.7155/jgaa.00131

Subject(s) - planar , computer science , heuristic , position (finance) , rna , orientation (vector space) , order (exchange) , algorithm , theoretical computer science , artificial intelligence , computer graphics (images) , mathematics , geometry , biology , biochemistry , finance , economics , gene

In this paper, we propose a new layout algorithm that draws the secondary structure of a Ribonucleic Acid (RNA) automatically according to some of the biologists’ aesthetic criteria. Such layout insures that two equivalent structures (or sub-structures) are drawn in a same and planar way. In order to allow a visual comparison of two RNAs, we use an heuristic that places the biggest similar part of the two structures in the same position and orientation.

The content you want is available to Zendy users.

Already have an account? Click here to sign in.

Having issues? You can contact us here

Accelerating Research