Cloning and characterization of a psychrophilic catalase gene from an antarctic bacterium
Author(s) -
Wei Wang,
Fang Wang,
Xiaofeng Ji,
Shanhong Liu,
Yuan Cui,
Mi Sun
Publication year - 2011
Publication title -
african journal of microbiology research
Language(s) - English
Resource type - Journals
ISSN - 1996-0808
DOI - 10.5897/ajmr11.166
Subject(s) - psychrophile , amino acid , catalase , biochemistry , gene , cloning (programming) , enzyme , open reading frame , bacteria , microbiology and biotechnology , biology , chemistry , peptide sequence , genetics , computer science , programming language
The gene of psychrophilic catalase BNC from Antarctic Bacillus sp. N2a was cloned by degenerate PCR and inverse PCR. BNC gene revealed a 1,461 bp open reading frame for a protein with 486 amino acids. The phylogenetic tree based on the amino acid sequences of BNC and representative psychrophilic microbial catalases manifested that BNC belonged to the Group III of the monofunctional catalase. The active-site residues of the structure-determined catalase were highly conserved in BNC. Comparison of the amino acid composition of BNC with its mesophilic homologue from Bacillus subtilis TE124 showed that BNC had properties of a cold-active enzyme.
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