z-logo
open-access-imgOpen Access
Characterization of a Y‐Family DNA Polymerase eta from the Eukaryotic Thermophile Alvinella pompejana
Author(s) -
Sayo Kashiwagi,
Isao Kuraoka,
Yoshie Fujiwara,
Kenichi Hitomi,
Quen J. Cheng,
Jill O. Fuss,
David Shin,
Chikahide Masutani,
John A. Tainer,
Fumio Hanaoka,
Shigenori Iwai
Publication year - 2010
Publication title -
journal of nucleic acids
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.621
H-Index - 32
eISSN - 2090-021X
pISSN - 2090-0201
DOI - 10.4061/2010/701472
Subject(s) - thermophile , polymerase , computational biology , genetics , dna polymerase , biology , dna , medicine , microbiology and biotechnology , bacteria
Human DNA polymerase η (HsPolη) plays an important role in translesion synthesis (TLS), which allows for replication past DNA damage such as UV-induced cis-syn cyclobutane pyrimidine dimers (CPDs). Here, we characterized ApPolη from the thermophilic worm Alvinella pompejana, which inhabits deep-sea hydrothermal vent chimneys. ApPolη shares sequence homology with HsPolη and contains domains for binding ubiquitin and proliferating cell nuclear antigen. Sun-induced UV does not penetrate Alvinella's environment; however, this novel DNA polymerase catalyzed efficient and accurate TLS past CPD, as well as 7,8-dihydro-8-oxoguanine and isomers of thymine glycol induced by reactive oxygen species. In addition, we found that ApPolη is more thermostable than HsPolη, as expected from its habitat temperature. Moreover, the activity of this enzyme was retained in the presence of a higher concentration of organic solvents. Therefore, ApPolη provides a robust, human-like Polη that is more active after exposure to high temperatures and organic solvents.

The content you want is available to Zendy users.

Already have an account? Click here to sign in.
Having issues? You can contact us here
Accelerating Research

Address

John Eccles House
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom