Genomic analysis of Skermanella stibiiresistens type strain SB22T
Author(s) -
Wentao Zhu,
Jing Huang,
Mingshun Li,
Xiangyang Li,
Gejiao Wang
Publication year - 2014
Publication title -
standards in genomic sciences
Language(s) - English
Resource type - Journals
ISSN - 1944-3277
DOI - 10.4056/sigs.5751047
Subject(s) - biology , gene , phylogenetic tree , genetics , genome , whole genome sequencing , strain (injury) , bacteria , biochemistry , microbiology and biotechnology , anatomy
Members of genus Skermanella were described as Gram-negative, motile, aerobic, rod-shaped, obligate-heterotrophic bacteria and unable to fix nitrogen. In this study, the genome sequence of Skermanella stibiiresistens SB22(T) is reported. Phylogenetic analysis using core proteins confirmed the phylogenetic assignment based on 16S rRNA gene sequences. Strain SB22(T) has all the proteins for complete glycolysis, tricarboxylic acid cycle and pentose phosphate pathway. The RuBisCO encoding genes cbbL1S1 and nitrogenase delta subunit gene anfG are absent, consistent with its inability to fix carbon and nitrogen, respectively. In addition, the genome possesses a series of flagellar assembly and chemotaxis genes to ensure its motility.
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