Genome sequence of the Lebeckia ambigua-nodulating “Burkholderia sprentiae” strain WSM5005T | Zendy

Wayne Reeve | Zendy; Sofie E. De Meyer | Zendy; Jason J. Terpolilli | Zendy; Vanessa Melino | Zendy; Julie Ardley | Zendy; Rui Tian | Zendy; Ravi Tiwari | Zendy; John Howieson | Zendy; Ron Yates | Zendy; Graham O’Hara | Zendy; Megan Lu | Zendy; David Bruce | Zendy; Chris Detter | Zendy; Roxanne Tapia | Zendy; Cliff Han | Zendy; ChiaLin Wei | Zendy; Marcel Huntemann | Zendy; James Han | Zendy; I-Min A. Chen | Zendy; Konstantinos Mavromatis | Zendy; Victor Markowitz | Zendy; Ernest Szeto | Zendy; Natalia Ivanova | Zendy; Natalia Mikhailova | Zendy; Galina Ovchinnikova | Zendy; Ioanna Pagani | Zendy; Amrita Pati | Zendy; Lynne Goodwin | Zendy; Lin Peters | Zendy; Sam Pitluck | Zendy; Tanja Woyke | Zendy; Nikos C. Kyrpides | Zendy

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Genome sequence of the Lebeckia ambigua-nodulating “Burkholderia sprentiae” strain WSM5005T

Author(s) -

Wayne Reeve,

Sofie E. De Meyer,

Jason J. Terpolilli,

Vanessa Melino,

Julie Ardley,

Rui Tian,

Ravi Tiwari,

John Howieson,

Ron Yates,

Graham O’Hara,

Megan Lu,

David Bruce,

Chris Detter,

Roxanne Tapia,

Cliff Han,

ChiaLin Wei,

Marcel Huntemann,

James Han,

I-Min A. Chen,

Konstantinos Mavromatis,

Victor Markowitz,

Ernest Szeto,

Natalia Ivanova,

Natalia Mikhailova,

Galina Ovchinnikova,

Ioanna Pagani,

Amrita Pati,

Lynne Goodwin,

Lin Peters,

Sam Pitluck,

Tanja Woyke,

Nikos C. Kyrpides

Publication year - 2013

Publication title -

standards in genomic sciences

Language(s) - English

Resource type - Journals

ISSN - 1944-3277

DOI - 10.4056/sigs.4558268

Subject(s) - biology , genome , contig , whole genome sequencing , gene , strain (injury) , burkholderia , genetics , sequence assembly , computational biology , transcriptome , bacteria , gene expression , anatomy

"Burkholderia sprentiae" strain WSM5005(T) is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated in Australia from an effective N2-fixing root nodule of Lebeckia ambigua collected in Klawer, Western Cape of South Africa, in October 2007. Here we describe the features of "Burkholderia sprentiae" strain WSM5005(T), together with the genome sequence and its annotation. The 7,761,063 bp high-quality-draft genome is arranged in 8 scaffolds of 236 contigs, contains 7,147 protein-coding genes and 76 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program.

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