Genome sequence and description of the heavy metal tolerant bacterium Lysinibacillus sphaericus strain OT4b.31
Author(s) -
Tito David Peña-Montenegro,
Jenny Dussán
Publication year - 2013
Publication title -
standards in genomic sciences
Language(s) - English
Resource type - Journals
ISSN - 1944-3277
DOI - 10.4056/sigs.4227894
Subject(s) - bioremediation , biology , prophage , genome , bacillus sphaericus , strain (injury) , microbiology and biotechnology , whole genome sequencing , bacteria , culex quinquefasciatus , homology (biology) , genetics , gene , botany , bacteriophage , bacillales , escherichia coli , aedes aegypti , anatomy , bacillus subtilis , larva
Lysinibacillus sphaericus strain OT4b.31 is a native Colombian strain having no larvicidal activity against Culex quinquefasciatus and is widely applied in the bioremediation of heavy-metal polluted environments. Strain OT4b.31 was placed between DNA homology groups III and IV. By gap-filling and alignment steps, we propose a 4,096,672 bp chromosomal scaffold. The whole genome (consisting of 4,856,302 bp long, 94 contigs and 4,846 predicted protein-coding sequences) revealed differences in comparison to the L. sphaericus C3-41 genome, such as syntenial relationships, prophages and putative mosquitocidal toxins. Sphaericolysin B354, the coleopteran toxin Sip1A and heavy metal resistance clusters from nik, ars, czc, cop, chr, czr and cad operons were identified. Lysinibacillus sphaericus OT4b.31 has applications not only in bioremediation efforts, but also in the biological control of agricultural pests.
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