Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4 | Zendy

Saraswoti Neupane | Zendy; Lynne Goodwin | Zendy; Nils Högberg | Zendy; Nikos C. Kyrpides | Zendy; Sadhna Alström | Zendy; David Bruce | Zendy; Beverly Quintana | Zendy; Christine Munk | Zendy; Hajnalka Daligault | Zendy; Hazuki Teshima | Zendy; Karen W. Davenport | Zendy; Krista G. Reitenga | Zendy; Lance Green | Zendy; Patrick Chain | Zendy; Tracy Erkkila | Zendy; Wei Gu | Zendy; Xiaojing Zhang | Zendy; Yan Xu | Zendy; Yulia Kunde | Zendy; Olga Chertkov | Zendy; James Han | Zendy; Cliff Han | Zendy; John C. Detter | Zendy; Natalia Ivanova | Zendy; Amrita Pati | Zendy; Amy Chen | Zendy; Ernest Szeto | Zendy; Kostas Mavromatis | Zendy; Marcel Huntemann | Zendy; Matt Nolan | Zendy; Sam Pitluck | Zendy; Shweta Deshpande | Zendy; Victor Markowitz | Zendy; Ioanna Pagani | Zendy; HansPeter Klenk | Zendy; Tanja Woyke | Zendy; Roger D. Finlay | Zendy

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Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4

Author(s) -

Saraswoti Neupane,

Lynne Goodwin,

Nils Högberg,

Nikos C. Kyrpides,

Sadhna Alström,

David Bruce,

Beverly Quintana,

Christine Munk,

Hajnalka Daligault,

Hazuki Teshima,

Karen W. Davenport,

Krista G. Reitenga,

Lance Green,

Patrick Chain,

Tracy Erkkila,

Wei Gu,

Xiaojing Zhang,

Yan Xu,

Yulia Kunde,

Olga Chertkov,

James Han,

Cliff Han,

John C. Detter,

Natalia Ivanova,

Amrita Pati,

Amy Chen,

Ernest Szeto,

Kostas Mavromatis,

Marcel Huntemann,

Matt Nolan,

Sam Pitluck,

Shweta Deshpande,

Victor Markowitz,

Ioanna Pagani,

HansPeter Klenk,

Tanja Woyke,

Roger D. Finlay

Publication year - 2013

Publication title -

standards in genomic sciences

Language(s) - English

Resource type - Journals

ISSN - 1944-3277

DOI - 10.4056/sigs.4027757

Subject(s) - biology , pseudogene , genome , gene , whole genome sequencing , genetics , plasmid , serratia , rhizosphere , bacteria , pseudomonas

Serratia proteamaculans S4 (previously Serratia sp. S4), isolated from the rhizosphere of wild Equisetum sp., has the ability to stimulate plant growth and to suppress the growth of several soil-borne fungal pathogens of economically important crops. Here we present the non-contiguous, finished genome sequence of S. proteamaculans S4, which consists of a 5,324,944 bp circular chromosome and a 129,797 bp circular plasmid. The chromosome contains 5,008 predicted genes while the plasmid comprises 134 predicted genes. In total, 4,993 genes are assigned as protein-coding genes. The genome consists of 22 rRNA genes, 82 tRNA genes and 58 pseudogenes. This genome is a part of the project "Genomics of four rapeseed plant growth-promoting bacteria with antagonistic effect on plant pathogens" awarded through the 2010 DOE-JGI's Community Sequencing Program.

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