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Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282T)
Author(s) -
Thomas Riedel,
Brittany Held,
Matt Nolan,
Susan Lucas,
Alla Lapidus,
Hope Tice,
Tijana Glavina Del Rio,
JanFang Cheng,
Cliff Han,
Roxanne Tapia,
Lynne Goodwin,
Sam Pitluck,
Konstantinos Liolios,
Konstantinos Mavromatis,
Ioanna Pagani,
Natalia Ivanova,
Natalia Mikhailova,
Amrita Pati,
Amy Chen,
Krishna Palaniappan,
Miriam Land,
Manfred Rohde,
Brian J. Tindall,
John C. Detter,
Markus Göker,
James Bristow,
Jonathan A. Eisen,
Victor Markowitz,
Philip Hugenholtz,
Nikos C. Kyrpides,
HansPeter Klenk,
Tanja Woyke
Publication year - 2012
Publication title -
standards in genomic sciences
Language(s) - English
Resource type - Journals
ISSN - 1944-3277
DOI - 10.4056/sigs.3216895
Subject(s) - biology , genome , whole genome sequencing , genetics , archaea , gene , type species , flavobacterium , flavobacteriaceae , genus , strain (injury) , bacteria , 16s ribosomal rna , botany , bacteroidetes , pseudomonas , anatomy
Gillisia limnaea Van Trappen et al. 2004 is the type species of the genus Gillisia, which is a member of the well characterized family Flavobacteriaceae. The genome of G. limnea R-8282(T) is the first sequenced genome (permanent draft) from a type strain of the genus Gillisia. Here we describe the features of this organism, together with the permanent-draft genome sequence and annotation. The 3,966,857 bp long chromosome (two scaffolds) with its 3,569 protein-coding and 51 RNA genes is a part of the GenomicEncyclopedia of Bacteria and Archaea project.

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