Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1) | Zendy

Konstantinos Mavromatis | Zendy; Olga Chertkov | Zendy; Alla Lapidus | Zendy; Matt Nolan | Zendy; Susan Lucas | Zendy; Hope Tice | Zendy; Tijana Glavina Del Rio | Zendy; JanFang Cheng | Zendy; Cliff Han | Zendy; Roxanne Tapia | Zendy; David Bruce | Zendy; Lynne Goodwin | Zendy; Sam Pitluck | Zendy; Marcel Huntemann | Zendy; Konstantinos Liolios | Zendy; Ioanna Pagani | Zendy; Natalia Ivanova | Zendy; Natalia Mikhailova | Zendy; Amrita Pati | Zendy; Amy Chen | Zendy; Krishna Palaniappan | Zendy; Miriam Land | Zendy; Evelyne-Marie Brambilla | Zendy; Manfred Rohde | Zendy; Stefan Spring | Zendy; Markus Göker | Zendy; John C. Detter | Zendy; James Bristow | Zendy; Jonathan A. Eisen | Zendy; Victor Markowitz | Zendy; Philip Hugenholtz | Zendy; Nikos C. Kyrpides | Zendy; HansPeter Klenk | Zendy; Tanja Woyke | Zendy

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Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1)

Author(s) -

Konstantinos Mavromatis,

Olga Chertkov,

Alla Lapidus,

Matt Nolan,

Susan Lucas,

Hope Tice,

Tijana Glavina Del Rio,

JanFang Cheng,

Cliff Han,

Roxanne Tapia,

David Bruce,

Lynne Goodwin,

Sam Pitluck,

Marcel Huntemann,

Konstantinos Liolios,

Ioanna Pagani,

Natalia Ivanova,

Natalia Mikhailova,

Amrita Pati,

Amy Chen,

Krishna Palaniappan,

Miriam Land,

Evelyne-Marie Brambilla,

Manfred Rohde,

Stefan Spring,

Markus Göker,

John C. Detter,

James Bristow,

Jonathan A. Eisen,

Victor Markowitz,

Philip Hugenholtz,

Nikos C. Kyrpides,

HansPeter Klenk,

Tanja Woyke

Publication year - 2012

Publication title -

standards in genomic sciences

Language(s) - English

Resource type - Journals

ISSN - 1944-3277

DOI - 10.4056/sigs.2816096

Subject(s) - whole genome sequencing , biology , genome , gene , strain (injury) , genetics , genome size , anatomy

Saprospira grandis Gross 1911 is a member of the Saprospiraceae, a family in the class 'Sphingobacteria' that remains poorly characterized at the genomic level. The species is known for preying on other marine bacteria via 'ixotrophy'. S. grandis strain Sa g1 was isolated from decaying crab carapace in France and was selected for genome sequencing because of its isolated location in the tree of life. Only one type strain genome has been published so far from the Saprospiraceae, while the sequence of strain Sa g1 represents the second genome to be published from a non-type strain of S. grandis. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 4,495,250 bp long Improved-High-Quality draft of the genome with its 3,536 protein-coding and 62 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

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