Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4T) | Zendy

Alex Copeland | Zendy; Xiaojing Zhang | Zendy; Monica Misra | Zendy; Alla Lapidus | Zendy; Matt Nolan | Zendy; Susan Lucas | Zendy; Shweta Deshpande | Zendy; JanFang Cheng | Zendy; Roxanne Tapia | Zendy; Lynne Goodwin | Zendy; Sam Pitluck | Zendy; Konstantinos Liolios | Zendy; Ioanna Pagani | Zendy; Natalia Ivanova | Zendy; Natalia Mikhailova | Zendy; Amrita Pati | Zendy; Amy Chen | Zendy; Krishna Palaniappan | Zendy; Miriam Land | Zendy; Loren Hauser | Zendy; Chongle Pan | Zendy; Cynthia D. Jeffries | Zendy; John C. Detter | Zendy; Evelyne-Marie Brambilla | Zendy; Manfred Rohde | Zendy; Olivier Duplex Ngatchou Djao | Zendy; Markus Göker | Zendy; Johannes Sikorski | Zendy; Brian J. Tindall | Zendy; Tanja Woyke | Zendy; James Bristow | Zendy; Jonathan A. Eisen | Zendy; Victor Markowitz | Zendy; Philip Hugenholtz | Zendy; Nikos C. Kyrpides | Zendy; HansPeter Klenk | Zendy; Konstantinos Mavromatis | Zendy

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Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4T)

Author(s) -

Alex Copeland,

Xiaojing Zhang,

Monica Misra,

Alla Lapidus,

Matt Nolan,

Susan Lucas,

Shweta Deshpande,

JanFang Cheng,

Roxanne Tapia,

Lynne Goodwin,

Sam Pitluck,

Konstantinos Liolios,

Ioanna Pagani,

Natalia Ivanova,

Natalia Mikhailova,

Amrita Pati,

Amy Chen,

Krishna Palaniappan,

Miriam Land,

Loren Hauser,

Chongle Pan,

Cynthia D. Jeffries,

John C. Detter,

Evelyne-Marie Brambilla,

Manfred Rohde,

Olivier Duplex Ngatchou Djao,

Markus Göker,

Johannes Sikorski,

Brian J. Tindall,

Tanja Woyke,

James Bristow,

Jonathan A. Eisen,

Victor Markowitz,

Philip Hugenholtz,

Nikos C. Kyrpides,

HansPeter Klenk,

Konstantinos Mavromatis

Publication year - 2012

Publication title -

standards in genomic sciences

Language(s) - English

Resource type - Journals

ISSN - 1944-3277

DOI - 10.4056/sigs.2475579

Subject(s) - biology , genome , whole genome sequencing , genetics , gene , plasmid , type species , archaea , genus , botany

Runella slithyformis Larkin and Williams 1978 is the type species of the genus Runella, which belongs to the Cytophagaceae, a family that was only recently classified to the order Cytophagales in the class Cytophagia. The species is of interest because it is able to grow at temperatures as low as 4°C. This is the first completed genome sequence of a member of the genus Runella and the sixth sequence from the family Cytophagaceae. The 6,919,729 bp long genome consists of a 6.6 Mbp circular genome and five circular plasmids of 38.8 to 107.0 kbp length, harboring a total of 5,974 protein-coding and 51 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

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