Draft genome sequence of strain HIMB100, a cultured representative of the SAR116 clade of marine Alphaproteobacteria | Zendy

Jana Grote | Zendy; Cansu Bayindirli | Zendy; Kristin Bergauer | Zendy; Paula Carpintero de Moraes | Zendy; Huan Chen | Zendy; Lindsay D’Ambrosio | Zendy; Bethanie R. Edwards | Zendy; Beatriz Fernández-Gómez | Zendy; Mariam Hamisi | Zendy; Ramiro Logares | Zendy; Dan Nguyen | Zendy; Yoshimi M. Rii | Zendy; Emily Saeck | Zendy; Charles A. Schutte | Zendy; Brittany Widner | Zendy; Matthew J. Church | Zendy; Grieg F. Steward | Zendy; David M. Karl | Zendy; Edward F. DeLong | Zendy; John M. Eppley | Zendy; Stephan C. Schuster | Zendy; Nikos C. Kyrpides | Zendy; Michael S. Rappé | Zendy

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Draft genome sequence of strain HIMB100, a cultured representative of the SAR116 clade of marine Alphaproteobacteria

Author(s) -

Jana Grote,

Cansu Bayindirli,

Kristin Bergauer,

Paula Carpintero de Moraes,

Huan Chen,

Lindsay D’Ambrosio,

Bethanie R. Edwards,

Beatriz Fernández-Gómez,

Mariam Hamisi,

Ramiro Logares,

Dan Nguyen,

Yoshimi M. Rii,

Emily Saeck,

Charles A. Schutte,

Brittany Widner,

Matthew J. Church,

Grieg F. Steward,

David M. Karl,

Edward F. DeLong,

John M. Eppley,

Stephan C. Schuster,

Nikos C. Kyrpides,

Michael S. Rappé

Publication year - 2011

Publication title -

standards in genomic sciences

Language(s) - English

Resource type - Journals

ISSN - 1944-3277

DOI - 10.4056/sigs.1854551

Subject(s) - alphaproteobacteria , biology , whole genome sequencing , clade , genome , gene , strain (injury) , genetics , marine bacteriophage , bacteria , phylogenetics , 16s ribosomal rna , anatomy

Strain HIMB100 is a planktonic marine bacterium in the class Alphaproteobacteria. This strain is of interest because it is one of the first known isolates from a globally ubiquitous clade of marine bacteria known as SAR116 within the family Rhodospirillaceae. Here we describe preliminary features of the organism, together with the draft genome sequence and annotation. This is the second genome sequence of a member of the SAR116 clade. The 2,458,945 bp genome contains 2,334 protein-coding and 42 RNA genes.

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