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Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122T)
Author(s) -
Miriam Land,
Rüdiger Pukall,
Birte Abt,
Markus Göker,
Manfred Rohde,
Tijana Glavina Del Rio,
Hope Tice,
Alex Copeland,
JanFang Cheng,
Susan Lucas,
Feng Chen,
Matt Nolan,
David Bruce,
Lynne Goodwin,
Sam Pitluck,
Natalia Ivanova,
Konstantinos Mavrommatis,
Galina Ovchinnikova,
Amrita Pati,
Amy Chen,
Krishna Palaniappan,
Loren Hauser,
YunJuan Chang,
Cynthia C. Jefferies,
Elizabeth Saunders,
Thomas Brettin,
John C. Detter,
Cliff Han,
Patrick Chain,
James Bristow,
Jonathan A. Eisen,
Victor Markowitz,
Philip Hugenholtz,
Nikos C. Kyrpides,
HansPeter Klenk,
Alla Lapidus
Publication year - 2009
Publication title -
standards in genomic sciences
Language(s) - English
Resource type - Journals
ISSN - 1944-3277
DOI - 10.4056/sigs.1162
Subject(s) - biology , replicon , whole genome sequencing , genome , genetics , phylogenetic tree , type species , peptidoglycan , gene , coccus (insect) , subfamily , genus , botany
Beutenbergia cavernae (Groth et al. 1999) is the type species of the genus and is of phylogenetic interest because of its isolated location in the actinobacterial suborder Micrococcineae. B. cavernae HKI 0122(T) is a Gram-positive, non-motile, non-spore-forming bacterium isolated from a cave in Guangxi (China). B. cavernae grows best under aerobic conditions and shows a rod-coccus growth cycle. Its cell wall peptidoglycan contains the diagnostic L-lysine ← L-glutamate interpeptide bridge. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from the poorly populated micrococcineal family Beutenbergiaceae, and this 4,669,183 bp long single replicon genome with its 4225 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

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