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Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207T)
Author(s) -
Kurt LaButti,
Shanmugam Mayilraj,
Alicia Clum,
Susan Lucas,
Tijana Glavina Del Rio,
Matt Nolan,
Hope Tice,
JanFang Cheng,
Sam Pitluck,
Konstantinos Liolios,
Natalia Ivanova,
Konstantinos Mavromatis,
Natalia Mikhailova,
Amrita Pati,
Lynne Goodwin,
Amy Chen,
Krishna Palaniappan,
Miriam Land,
Loren Hauser,
Yun-Juan Chang,
Cynthia D. Jeffries,
Manfred Rohde,
Stefan Spring,
Markus Göker,
Tanja Woyke,
James Bristow,
Jonathan A. Eisen,
Victor Markowitz,
Philip Hugenholtz,
Nikos C. Kyrpides,
HansPeter Klenk,
Alla Lapidus
Publication year - 2010
Publication title -
standards in genomic sciences
Language(s) - English
Resource type - Journals
ISSN - 1944-3277
DOI - 10.4056/sigs.1092865
Subject(s) - phylum , type species , biology , whole genome sequencing , archaea , genome , genetics , contig , gene , genus , zoology
Dethiosulfovibrio peptidovorans Magot et al. 1997 is the type species of the genus Dethiosulfovibrio of the family Synergistaceae in the recently created phylum Synergistetes. The strictly anaerobic, vibriod, thiosulfate-reducing bacterium utilizes peptides and amino acids, but neither sugars nor fatty acids. It was isolated from an offshore oil well where it was been reported to be involved in pitting corrosion of mild steel. Initially, this bacterium was described as a distant relative of the genus Thermoanaerobacter, but was not assigned to a genus, it was subsequently placed into the novel phylum Synergistetes. A large number of repeats in the genome sequence prevented an economically justifiable closure of the last gaps. This is only the third published genome from a member of the phylum Synergistetes. The 2,576,359 bp long genome consists of three contigs with 2,458 protein-coding and 59 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.

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