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Cloning, Expression, and Characterization of a Thermostable GH51 α-L-Arabinofuranosidase from Paenibacillus sp. DG-22
Author(s) -
Sun Hwa Lee,
YongEok Lee
Publication year - 2014
Publication title -
journal of microbiology and biotechnology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.601
H-Index - 64
eISSN - 1738-8872
pISSN - 1017-7825
DOI - 10.4014/jmb.1308.08078
Subject(s) - molecular mass , molecular cloning , biochemistry , recombinant dna , histidine , enzyme , microbiology and biotechnology , glycosyl , open reading frame , affinity chromatography , escherichia coli , peptide sequence , biology , paenibacillus , enzyme assay , amino acid , expression vector , chemistry , gene , 16s ribosomal rna
The gene encoding α-L-arabinofuranosidase (AFase) from Paenibacillus sp. DG-22 was cloned, sequenced, and expressed in Escherichia coli. The AFase gene (abfA) comprises a 1,509 bp open reading frame encoding 502 amino acids with a molecular mass of 56,520 daltons. The deduced amino acid sequence of the gene shows that AbfA is an enzyme consisting of only a catalytic domain, and that the enzyme has significant similarity to AFases classified into the family 51 of the glycosyl hydrolases. abfA was subcloned into the pQE60 expression vector to fuse it with a six-histidine tag and the recombinant AFase (rAbfA) was purified to homogeneity. The specific activity of the recombinant enzyme was 96.7 U/mg protein. Determination of the apparent molecular mass by gel-filtration chromatography indicated that AbfA has a tetrameric structure. The optimal pH and temperature of the enzyme were 6.0 and 60°C, respectively. The enzyme activity was completely inhibited by 1 mM HgCl2. rAbfA was active only towards p-nitrophephenyl α-L-arabinofuranoside and exhibited Km and Vmax values of 3.5 mM and 306.1 U/mg, respectively. rAbfA showed a synergistic effect in combination with endoxylanase on the degradation of oat spelt xylan and wheat arabinoxylan.

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