The Functional Effects of Key Driver KRAS Mutations on Gene Expression in Lung Cancer
Author(s) -
Jisong Zhang,
Huihui Hu,
Shan Xu,
Hanliang Jiang,
Jihong Zhu,
Enqiang Qin,
Zhengfu He,
Enguo Chen
Publication year - 2020
Publication title -
frontiers in genetics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.413
H-Index - 81
ISSN - 1664-8021
DOI - 10.3389/fgene.2020.00017
Subject(s) - kras , lung cancer , mutation , cancer research , cancer , oncogene , gene , medicine , biology , oncology , genetics , cell cycle
Lung cancer is a common malignant cancer. Kirsten rat sarcoma oncogene (KRAS) mutations have been considered as a key driver for lung cancers. KRAS p.G12C mutations were most predominant in NSCLC which was comprised about 11–16% of lung adenocarcinomas (p.G12C accounts for 45–50% of mutant KRAS). But it is still not clear how the KRAS mutation triggers lung cancers. To study the molecular mechanisms of KRAS mutation in lung cancer. We analyzed the gene expression profiles of 156 KRAS mutation samples and other negative samples with two stage feature selection approach: (1) minimal Redundancy Maximal Relevance (mRMR) and (2) Incremental Feature Selection (IFS). At last, 41 predictive genes for KRAS mutation were identified and a KRAS mutation predictor was constructed. Its leave one out cross validation MCC was 0.879. Our results were helpful for understanding the roles of KRAS mutation in lung cancer.
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