UV cross-linking/immunoprecipitation assay: glucocorticoid receptor-adrenergic receptor gene sequence interaction
Author(s) -
Ying Bai,
Philbert Kirigiti,
Xiaorong Li,
Biao Li,
Tian Li,
Mark Y.-J.,
Curtis A. Machida
Publication year - 2003
Publication title -
biotechniques
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.617
H-Index - 131
eISSN - 1940-9818
pISSN - 0736-6205
DOI - 10.2144/03351rr02
Subject(s) - immunoprecipitation , electrophoretic mobility shift assay , microbiology and biotechnology , biology , oligonucleotide , glucocorticoid receptor , receptor , gene expression , gene , chromatin immunoprecipitation , biochemistry , promoter
The rat β 1 -adrenergic receptor (β 1 -AR) gene contains glucocorticoid response element (GRE) half-sites at positions -2767 and -945. In electrophoretic mobility shift assay (EMSA) experiments, neither β 1 -AR GRE half-site recognized glucocorticoid receptors (GRs) obtained from baculovirus high-level expression systems or from mammalian cells. We have developed a sensitive UV crosslinking/immunoprecipitation assay, using a 524-bp fragment containing the prototypical GRE obtained from the rat tyrosine aminotransferase promoter sequence and using antibodies recognizing mammalian GR. Using this assay, we provide evidence that rat β 1 -AR gene sequences recognize mammalian GRs expressed in mouse 3T3 cells and that the site of GR interaction does not appear to specifically contain the β 1 -AR GRE half-sites. This represents one of the first reports demonstrating the utility of a UV cross-linking/immunoprecipitation assay in the detection of mammalian GR interaction with β 1 -AR sequences, is consistent with the lack of specific DNA-GR protein complexes observed in EMSA experiments using oligonucleotide probes containing the β 1 -AR GRE half-sites, and provides evidence that mammalian GR interaction occurs at complex rat β 1 -AR gene sequences.
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