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Improving patient classification and biomarker assessment using Gaussian Mixture Models and Bayes’ rule
Author(s) -
Marina A. Guvakova
Publication year - 2019
Publication title -
oncoscience
Language(s) - English
Resource type - Journals
ISSN - 2331-4737
DOI - 10.18632/oncoscience.494
Subject(s) - bayes' theorem , mixture model , bayesian probability , leverage (statistics) , cutoff , continuous variable , computer science , naive bayes classifier , gaussian , artificial intelligence , pattern recognition (psychology) , machine learning , statistics , mathematics , support vector machine , physics , quantum mechanics
In clinical research, determining cutoff values for continuous variables in test results remains challenging, particularly when considering candidate biomarkers or therapeutic targets for disease. Distribution of a continuous variable into two populations is known as dichotomization and has been commonly used in clinical studies. We recently reported a new method for determining multiple cutoffs for continuous variables. The development of this original approach was based on fitting Gaussian Mixture Models (GMM) onto real-world clinical data. We also explored how to leverage Bayesian probability to minimize uncertainty while classifying individual patients into respective subpopulations. In addition, we investigated the performance of the proposed method for the distribution of classical prognostic markers in breast cancer. Finally, we applied the proposed method to analyze a candidate marker and a target for cancer therapy. Here, we present an overview of this method and our prospects for its implementation in biomedical and clinical research.

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