RAPD and ISSR Methods Used for Fingerprinting of Selected Accessions of Viburnum
Author(s) -
Marcelina Krupa-Małkiewicz,
M. Smolik,
Anna BARNIAK,
B. Smolik
Publication year - 2014
Publication title -
notulae scientia biologicae
Language(s) - English
Resource type - Journals
eISSN - 2067-3264
pISSN - 2067-3205
DOI - 10.15835/nsb639422
Subject(s) - viburnum , rapd , biology , botany , dendrogram , genetic diversity , genetic relationship , genetic similarity , population , demography , sociology
Randomly amplified polymorphic DNA (RAPD) and inter simple sequence repeat (ISSR) markers were used to investigate genetic variability within thirteen Viburnum species ( Viburnum × hillieri; V. dilatatum ; Viburnum × carlcephalum; V. opulus ; V. hupehense ; Viburnum × bodnantense; Viburnum × burkwoodii; V. sieboldii ; Viburnum × globosum ‘Jermyns Globe’ ; V. alnifolium (lantanoides); V. plicatum ‘Sterile’ ; V. plicatum f. tomentosum and V. plicatum ‘Watanabe’) of wide geographical distribution, collected in the Dendrological Garden in Przelewice (the north-west part of Poland). Twenty-three RAPD and fourteen ISSR primers generated a total of 690 and 418 reproducible bands, respectively, and 39% (RAPD) and 55.5% (ISSR) of them were polymorphic for the two marker systems, which suggest high genetic variability within Viburnum genus. However, high numbers of genotype-specific bands, i.e. 60.9% (RAPD) and 44.5% (ISSR), were seen in Viburnum . Genetic similarity assessed within Viburnum species with the RAPD and ISSR analyses ranged from 6 to 42% and from 6 to 31%, respectively. Both RAPD and ISSR-based dendrograms clustered in five main groups. The Mantel test between two Nei’s similarity matrices gave correlation coefficient r = 0.305*, showing low correlation between RAPD- and ISSR- based matrices. Thus, both marker systems were equally important for the genetic diversity analysis in Viburnum genus .
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