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Identification of Critical Amino Acids Conferring Lethality in VopK, a Type III Effector Protein of Vibrio cholerae: Lessons from Yeast Model System
Author(s) -
Leela Krishna Bankapalli,
Rahul Chandra Mishra,
Balvinder Singh,
Saumya Raychaudhuri
Publication year - 2015
Publication title -
plos one
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.99
H-Index - 332
ISSN - 1932-6203
DOI - 10.1371/journal.pone.0141038
Subject(s) - vibrio cholerae , biology , in silico , alanine , mutagenesis , effector , serine , yeast , site directed mutagenesis , biochemistry , amino acid , peptide sequence , mutation , genetics , mutant , bacteria , gene , enzyme
VopK, a type III effector protein, has been implicated in the pathogenesis of Vibrio cholerae strains belonging to diverse serogroups. Ectopic expression of this protein exhibits strong toxicity in yeast model system. In order to map critical residues in VopK, we scanned the primary sequence guided by available data on various toxins and effector proteins. Our in silico analysis of VopK indicated the presence of predicted MCF1-SHE (SHxxxE) serine peptidase domain at the C-terminus region of the protein. Substitution of each of the predicted catalytic triad residues namely Ser 314 , His 353 and Glu 357 with alanine resulted in recombinant VopK proteins varying in lethality as evaluated in yeast model system. We observed that replacement of glutamate 357 to alanine causes complete loss in toxicity while substitutions of serine 314 and histidine 353 with alanine exhibited partial loss in toxicity without affecting the stability of variants. In addition, replacement of another conserved serine residue at position 354 (S 354 ) within predicted S 314 H 353 E 357 did not affect toxicity of VopK. In essence, combined in silico and site directed mutagenesis, we have identified critical amino acids contributing to the lethal activity of VopK in yeast model system.

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