Natural Biased Coin Encoded in the Genome Determines Cell Strategy
Author(s) -
Faezeh Dorri,
Hamid Mahini,
Ali SharifiZarchi,
Mehdi Totonchi,
Ruzbeh Tusserkani,
Hamid Pezeshk,
Mehdi Sadeghi
Publication year - 2014
Publication title -
plos one
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.99
H-Index - 332
ISSN - 1932-6203
DOI - 10.1371/journal.pone.0103569
Subject(s) - competitor analysis , gene regulatory network , genome , biology , lysogenic cycle , computational biology , gene , attractor , computer science , genetics , bacteriophage , evolutionary biology , economics , mathematics , escherichia coli , gene expression , management , mathematical analysis
Decision making at a cellular level determines different fates for isogenic cells. However, it is not yet clear how rational decisions are encoded in the genome, how they are transmitted to their offspring, and whether they evolve and become optimized throughout generations. In this paper, we use a game theoretic approach to explain how rational decisions are made in the presence of cooperators and competitors. Our results suggest the existence of an internal switch that operates as a biased coin. The biased coin is, in fact, a biochemical bistable network of interacting genes that can flip to one of its stable states in response to different environmental stimuli. We present a framework to describe how the positions of attractors in such a gene regulatory network correspond to the behavior of a rational player in a competing environment. We evaluate our model by considering lysis/lysogeny decision making of bacteriophage lambda in E. coli .
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