An Information-Theoretic Analysis of Genetics, Gender and Age in Cancer Patients
Author(s) -
Gurinder S. Atwal,
Raúl Rabadán,
Guillermina Lozano,
Louise C. Strong,
Mariëlle Ruijs,
Marjanka K. Schmidt,
Laura J. van’t Veer,
Heli Nevanlinna,
Johanna Tommiska,
Kristiina Aittomäki,
Gaëlle Bougeard,
Thierry Frébourg,
Arnold J. Levine,
Gareth L. Bond
Publication year - 2008
Publication title -
plos one
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.99
H-Index - 332
ISSN - 1932-6203
DOI - 10.1371/journal.pone.0001951
Subject(s) - germline , carcinogenesis , cancer , genetics , biology , germline mutation , mutation , bioinformatics , computational biology , gene
Germline genetics, gender and hormonal-signaling pathways are all well described modifiers of cancer risk and progression. Although an improved understanding of how germline genetic variants interact with other cancer risk factors may allow better prevention and treatment of human cancer, measuring and quantifying these interactions is challenging. In other areas of research, Information Theory has been used to quantitatively describe similar multivariate interactions. We implemented a novel information-theoretic analysis to measure the joint effect of a high frequency germline genetic variant of the p53 tumor suppressor pathway (MDM2 SNP309 T/G) and gender on clinical cancer phenotypes. This analysis quantitatively describes synergistic interactions among gender, the MDM2 SNP309 locus, and the age of onset of tumorigenesis in p53 mutation carriers. These results offer a molecular and genetic basis for the observed sexual dimorphism of cancer risk in p53 mutation carriers and a model is proposed that suggests a novel cancer prevention strategy for p53 mutation carriers.
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