Open AccessFast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures
Author(s) -
Steve Hoffmann,
Christian Otto,
Stefan Kurtz,
Cynthia M. Sharma,
Philipp Khaitovich,
Jörg Vogel,
Peter F. Stadler,
Jörg Hackermüller
Publication year - 2009
Publication title -
plos computational biology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.628
H-Index - 182
eISSN - 1553-7358
pISSN - 1553-734X
DOI - 10.1371/journal.pcbi.1000502
Subject(s) - computer science , indel , software , k mer , algorithm , error detection and correction , heuristics , reference genome , sequence assembly , computational biology , dna sequencing , data mining , biology , genetics , transcriptome , dna , gene , gene expression , genotype , single nucleotide polymorphism , programming language , operating system
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