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Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data
Author(s) -
Julie A. McMurry,
Nick Juty,
Niklas Blomberg,
Tony Burdett,
Tom Conlin,
Nathalie Conte,
Mélanie Courtot,
John Deck,
Michel Dumontier,
Donal Fellows,
Alejandra González-Beltrán,
Philipp Gormanns,
Jeffrey S. Grethe,
Janna Hastings,
Jean-Karim Hèriché,
Henning Hermjakob,
Jon Ison,
Rafael C. Jiménez,
Simon Jupp,
John Kunze,
Camille Laibe,
Nicolas Le Novère,
James Malone,
María Martin,
Johanna McEntyre,
Chris Morris,
Juha Muilu,
Wolfgang G. Müller,
Philippe RoccaSerra,
SusannaAssunta Sansone,
Murat Sariyar,
Jacky L. Snoep,
Stian SoilandReyes,
Natalie Stanford,
Neil Swainston,
Nicole L. Washington,
Alan Williams,
Sarala Wimalaratne,
Lilly Winfree,
Katherine Wolstencroft,
Carole Goble,
Chris Mungall,
Melissa Haendel,
Helen Parkinson
Publication year - 2017
Publication title -
plos biology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 4.127
H-Index - 271
eISSN - 1545-7885
pISSN - 1544-9173
DOI - 10.1371/journal.pbio.2001414
Subject(s) - identifier , reuse , unique identifier , context (archaeology) , relevance (law) , data science , computer science , world wide web , biology , paleontology , political science , law , programming language , ecology
In many disciplines, data are highly decentralized across thousands of online databases (repositories, registries, and knowledgebases). Wringing value from such databases depends on the discipline of data science and on the humble bricks and mortar that make integration possible; identifiers are a core component of this integration infrastructure. Drawing on our experience and on work by other groups, we outline 10 lessons we have learned about the identifier qualities and best practices that facilitate large-scale data integration. Specifically, we propose actions that identifier practitioners (database providers) should take in the design, provision and reuse of identifiers. We also outline the important considerations for those referencing identifiers in various circumstances, including by authors and data generators. While the importance and relevance of each lesson will vary by context, there is a need for increased awareness about how to avoid and manage common identifier problems, especially those related to persistence and web-accessibility/resolvability. We focus strongly on web-based identifiers in the life sciences; however, the principles are broadly relevant to other disciplines.

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