Chlorophenol Hydroxylase Activity Encoded byTfdBfrom 2,4-Dichlorophenoxyacetic Acid (2,4-D)-DegradingBradyrhizobiumsp. Strain RD5-C2
Author(s) -
Nguyễn Lan Hương,
Kazuhito Itoh,
Masao Miyamoto,
Kousuke Suyama,
Hiroki Yamamoto
Publication year - 2007
Publication title -
bioscience biotechnology and biochemistry
Language(s) - Uncategorized
Resource type - Journals
SCImago Journal Rank - 0.509
H-Index - 116
eISSN - 1347-6947
pISSN - 0916-8451
DOI - 10.1271/bbb.70106
Subject(s) - sphingomonas , bradyrhizobium , gene , biology , strain (injury) , escherichia coli , bradyrhizobium japonicum , proteobacteria , nucleic acid sequence , nucleotide , amino acid , biochemistry , bacteria , microbiology and biotechnology , genetics , 16s ribosomal rna , rhizobiaceae , rhizobium , symbiosis , anatomy
The tfdB gene encoding chlorophenol hydroxylase and its homolog were found in 2,4-dichlorophenoxyacetic acid (2,4-D)-degrading strain RD5-C2, which belongs to Bradyrhizobium sp. of alpha-Proteobacteria. The nucleotide and deduced amino acid sequence identities of the two genes, designated tfdBa and tfdBb, were 60% and 57% respectively. Their nucleotide sequences most closely matched those of previously reported tfdB, which consisted of those from 2,4-D-degrading beta- and gamma-Proteobacteria and Sphingomonas sp. in alpha-Proteobacteria, with 61-67% identity. The TfdBa expressed in Escherichia coli showed the highest activity for 2,4-dichlorophenol but a narrower range of activity for the other chlorophenols than previously reported TfdBs. In the case of TfdBb, however, no observable activity for any chlorophenols or phenol was detected, although production of a protein with an appropriate molecular size was observed. Based on codon usage patterns and the GC content of the genes, it probable that the tfdBa genes in the 2,4-D-degrading Bradyrhizobium sp. were obtained through horizontal gene transfer.
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