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L-Myc protein synthesis is initiated by internal ribosome entry
Author(s) -
Catherine L. Jopling,
Keith A. Spriggs,
Sally A. Mitchell,
Mark Stoneley,
Anne E. Willis
Publication year - 2004
Publication title -
rna
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.037
H-Index - 171
eISSN - 1469-9001
pISSN - 1355-8382
DOI - 10.1261/rna.5138804
Subject(s) - biology , ribosome , protein biosynthesis , computational biology , internal ribosome entry site , genetics , translation (biology) , microbiology and biotechnology , rna , messenger rna , gene
An internal ribosome entry segment (IRES) has been identified in the 5′ untranslated region (5′ UTR) of two members of the myc family of proto-oncogenes, c- myc and N- myc . Hence, the synthesis of c-Myc and N-Myc polypeptides can involve the alternative mechanism of internal initiation. Here, we show that the 5′ UTR of L- myc , another myc family member, also contains an IRES. Previous studies have shown that the translation of mRNAs containing the c- myc and N- myc IRESs can involve both cap-dependent initiation and internal initiation. In contrast, the data presented here suggest that internal initiation can account for all of the translation initiation that occurs on an mRNA with the L- myc IRES in its 5′ UTR. Like many other cellular IRESs, the L- myc IRES appears to be modular in nature and the entire 5′ UTR is required for maximum IRES efficiency. The ribosome entry window within the L- myc IRES is located some distance upstream of the initiation codon, and thus, this IRES uses a “land and scan” mechanism to initiate translation. Finally, we have derived a secondary structural model for the IRES. The model confirms that the L- myc IRES is highly structured and predicts that a pseudoknot may form near the 5′ end of the mRNA.

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