The POU-er of gene nomenclature
Author(s) -
Stephen Frankenberg,
Dale Frank,
Richard M. Harland,
Andrew D. Johnson,
Jennifer Nichols,
Hitoshi Niwa,
Hans R. Schöler,
Elly M. Tanaka,
Chris Wylie,
Joshua M. Brickman
Publication year - 2014
Publication title -
development
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.754
H-Index - 325
eISSN - 1477-9129
pISSN - 0950-1991
DOI - 10.1242/dev.108407
Subject(s) - biology , zebrafish , pou domain , lineage (genetic) , vertebrate , gene , confusion , evolutionary biology , genetics , nomenclature , regulator , function (biology) , conserved sequence , embryonic stem cell , computational biology , transcription factor , taxonomy (biology) , zoology , peptide sequence , homeobox , psychology , psychoanalysis
The pluripotency factor POU5F1 (OCT4) is well known as a key regulator of stem cell fate. Homologues of POU5F1 exist throughout vertebrates, but the evolutionary and functional relationships between the various family members have been unclear. The level to which function has been conserved within this family provides insight into the evolution of early embryonic potency. Here, we seek to clarify the relationship between POU5F1 homologues in the vertebrate lineage, both phylogenetically and functionally. We resolve the confusion over the identity of the zebrafish gene, which was originally named pou2, then changed to pou5f1 and again, more recently, to pou5f3. We argue that the use of correct nomenclature is crucial when discussing the degree to which the networks regulating early embryonic differentiation are conserved.
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