Bayesian inference for psychometric functions
Author(s) -
Malte Kuß,
Frank Jäkel,
Felix A. Wichmann
Publication year - 2005
Publication title -
journal of vision
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.126
H-Index - 113
ISSN - 1534-7362
DOI - 10.1167/5.5.8
Subject(s) - bayesian probability , markov chain monte carlo , bayesian inference , inference , bayesian linear regression , posterior probability , confidence interval , statistics , computer science , prior probability , likelihood function , statistical inference , mathematics , artificial intelligence , pattern recognition (psychology) , estimation theory
In psychophysical studies, the psychometric function is used to model the relation between physical stimulus intensity and the observer's ability to detect or discriminate between stimuli of different intensities. In this study, we propose the use of Bayesian inference to extract the information contained in experimental data to estimate the parameters of psychometric functions. Because Bayesian inference cannot be performed analytically, we describe how a Markov chain Monte Carlo method can be used to generate samples from the posterior distribution over parameters. These samples are used to estimate Bayesian confidence intervals and other characteristics of the posterior distribution. In addition, we discuss the parameterization of psychometric functions and the role of prior distributions in the analysis. The proposed approach is exemplified using artificially generated data and in a case study for real experimental data. Furthermore, we compare our approach with traditional methods based on maximum likelihood parameter estimation combined with bootstrap techniques for confidence interval estimation and find the Bayesian approach to be superior.
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