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The Production of Standardized Samples with Known Concentrations for Severe Acute Respiratory Syndrome Coronavirus 2 RT-qPCR Testing Validation for Developing Countries in the Period of the Pandemic Era
Author(s) -
Hoang Quoc Cuong,
Hai Duc Nguyen,
Hoang Thuy Linh,
Nguyễn Trung Hiếu,
Nguyễn Hoàng Anh,
Ton Tran,
Tran Cat Dong,
Vu Thanh Thao,
Do Thi Hong Tuoi,
Nguyễn Đức Tuấn,
Huynh Thi Kim Loan,
Nguyễn Thành Long,
Cao Minh Thang,
Nguyễn Thị Thảo,
Phan Trong Lan
Publication year - 2021
Publication title -
biomed research international
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.772
H-Index - 126
eISSN - 2314-6141
pISSN - 2314-6133
DOI - 10.1155/2021/5516344
Subject(s) - pandemic , gold standard (test) , biosafety , medicine , coronavirus , covid-19 , virology , pneumonia , detection limit , disease , infectious disease (medical specialty) , chemistry , pathology , chromatography
Background Severe acute respiratory syndrome coronavirus 2 ( SARS-CoV-2 ) has caused a pandemic of pneumonia spreading around the world, leading to serious threats to public health and attracting enormous attention. There is an urgent need for sensitive diagnostic testing implementation to control and manage SARS-CoV-2 in public health laboratories. The quantitative reverse transcription PCR (RT-qPCR) assay is the gold standard method, but the sensitivity and specificity of SARS-CoV-2 testing are dependent on a number of factors.Methods We synthesized RNA based on the genes published to estimate the concentration of inactivated virus samples in a biosafety level 3 laboratory. The limit of detection (LOD), linearity, accuracy, and precision were evaluated according to the bioanalytical method validation guidelines.Results We found that the LOD reached around 3 copies/reaction. Furthermore, intra-assay precision, accuracy, and linearity met the accepted criterion with an RSD for copies of less than 25%, and linear regression met the accepted R 2 of 0.98.Conclusions We suggest that synthesized RNA based on the database of the NCBI gene bank for estimating the concentration of inactivated virus samples provides a potential opportunity for reliable testing to diagnose coronavirus disease 2019 (COVID-19) as well as limit the spread of the disease. This method may be relatively quick and inexpensive, and it may be useful for developing countries during the pandemic era. In the long term, it is also applicable for evaluation, verification, validation, and external quality assessment.

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