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An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine
Author(s) -
Tzu-Chieh Hung,
WenYuan Lee,
KuenBao Chen,
Yueh-Chiu Chan,
Calvin YuChian Chen
Publication year - 2014
Publication title -
biomed research international
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.772
H-Index - 126
eISSN - 2314-6141
pISSN - 2314-6133
DOI - 10.1155/2014/428210
Subject(s) - carcinogenesis , molecular dynamics , computational biology , docking (animal) , chemistry , hydrogen bond , tryptophan , gtpase , biochemistry , amino acid , bioinformatics , biology , cancer research , medicine , computational chemistry , gene , molecule , nursing , organic chemistry
Recently, an important topic of liver tumorigenesis had been published in 2013. In this report, Ras and Rho had defined the relation of liver tumorigenesis. The traditional Chinese medicine (TCM) database has been screened for molecular compounds by simulating molecular docking and molecular dynamics to regulate Ras and liver tumorigenesis. Saussureamine C, S-allylmercaptocysteine, and Tryptophan are selected based on the highest docking score than other TCM compounds. The molecular dynamics are helpful in the analysis and detection of protein-ligand interactions. Based on the docking poses, hydrophobic interactions, and hydrogen bond variations, this research surmises are the main regions of important amino acids in Ras. In addition to the detection of TCM compound efficacy, we suggest Saussureamine C is better than the others for protein-ligand interaction.

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