Shannon Information and Power Law Analysis of the Chromosome Code
Author(s) -
J. A. Tenreiro Machado
Publication year - 2012
Publication title -
abstract and applied analysis
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.228
H-Index - 56
eISSN - 1687-0409
pISSN - 1085-3375
DOI - 10.1155/2012/439089
Subject(s) - mathematics , alphabet , histogram , character (mathematics) , entropy (arrow of time) , ascii , chromosome , word (group theory) , information theory , statistics , artificial intelligence , computer science , linguistics , biology , genetics , philosophy , physics , geometry , quantum mechanics , image (mathematics) , gene , operating system
This paper studies the information content of the chromosomes of twenty-three species. Several statistics considering different number of bases for alphabet character encoding are derived. Based on the resulting histograms, word delimiters and character relative frequencies are identified. The knowledge of this data allows moving along each chromosome while evaluating the flow of characters and words. The resulting flux of information is captured by means of Shannon entropy. The results are explored in the perspective of power law relationships allowing a quantitative evaluation of the DNA of the species
Accelerating Research
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom
Address
John Eccles HouseRobert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom