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Dioxaphosphorinane-Constrained Nucleic Acid Dinucleotides as Tools for Structural Tuning of Nucleic Acids
Author(s) -
Dan-Andrei Catana,
BriceLoïc Renard,
Marie Maturano,
Corinne Payrastre,
Nathalie Tarrat,
JeanMarc Escudier
Publication year - 2012
Publication title -
journal of nucleic acids
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.621
H-Index - 32
eISSN - 2090-021X
pISSN - 2090-0201
DOI - 10.1155/2012/215876
Subject(s) - nucleic acid , computational biology , computer science , nucleic acid structure , bioinformatics , chemistry , biochemistry , biology , rna , gene
We describe a rational approach devoted to modulate the sugar-phosphate backbone geometry of nucleic acids. Constraints were generated by connecting one oxygen of the phosphate group to a carbon of the sugar moiety. The so-called dioxaphosphorinane rings were introduced at key positions along the sugar-phosphate backbone allowing the control of the six-torsion angles α to ζ defining the polymer structure. The syntheses of all the members of the D-CNA family are described, and we emphasize the effect on secondary structure stabilization of a couple of diastereoisomers of α , β -D-CNA exhibiting wether B-type canonical values or not.

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