Open AccessMolecular Subtyping of Vibrio cholerae O1 and O139 by Pulsed-Field Gel Electrophoresis in Hong Kong: Correlation with Epidemiological Events from 1994 to 2002
Author(s) -
Kai Man Kam,
Cindy Kit Yee Luey,
Yee Man Tsang,
Choi Ping Law,
Man Yu Chu,
Tze Leung Cheung,
Agatha Wai Huen Chiu
Publication year - 2003
Publication title -
journal of clinical microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.349
H-Index - 255
eISSN - 1070-633X
pISSN - 0095-1137
DOI - 10.1128/jcm.41.10.4502-4511.2003
Subject(s) - pulsed field gel electrophoresis , vibrio cholerae , subtyping , molecular epidemiology , biology , microbiology and biotechnology , gel electrophoresis , outbreak , genetics , virology , genotype , bacteria , gene , computer science , programming language
Two hundred twenty isolates of Vibrio cholerae O1 and O139 collected from 1994 to 2002 in Hong Kong were analyzed by pulsed-field gel electrophoresis (PFGE). Chromosomal DNAs from all V. cholerae isolates in agarose plugs were digested with the restriction enzyme NotI, resulting in 20 to 27 bands. Sixty distinctive PFGE patterns in the range of 10 to 300 kb were noted among 213 isolates typeable by PFGE. By comparing the common PFGE patterns obtained from four well-defined outbreaks of V. cholerae O1 and O139 with those obtained from other, epidemiologically unrelated isolates during the study period, indistinguishable and similar PFGE patterns were identified, indicating their close relatedness, in agreement with the results of epidemiological investigations. Heterogeneous PFGE patterns (with four to six banding differences), however, were identified among strains that were imported from other parts of Asia, including Indonesia, India, and Pakistan. Correlations with epidemiological information further support the usefulness of PFGE as an epidemiological tool in laboratory investigations of suspected outbreaks. Standardization of PFGE methodology will allow international comparison of fingerprint patterns and will form the basis of a laboratory network for tracking V. cholerae.