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Genome Sequence of the Bacterium Streptomyces davawensis JCM 4913 and Heterologous Production of the Unique Antibiotic Roseoflavin
Author(s) -
Frank Jankowitsch,
Julia Schwarz,
Christian Rückert,
Bertolt Gust,
Rafael Szczepanowski,
Jochen Blom,
Stefan Pelzer,
Jörn Kalinowski,
Matthias Mack
Publication year - 2012
Publication title -
journal of bacteriology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.652
H-Index - 246
eISSN - 1067-8832
pISSN - 0021-9193
DOI - 10.1128/jb.01592-12
Subject(s) - biology , streptomyces coelicolor , streptomyces , genetics , gene , streptomyces avermitilis , operon , streptomycetaceae , plasmid , transfer rna , bacteria , actinomycetales , escherichia coli , rna
Streptomyces davawensis JCM 4913 synthesizes the antibiotic roseoflavin, a structural riboflavin (vitamin B2 ) analog. Here, we report the 9,466,619-bp linear chromosome ofS. davawensis JCM 4913 and a 89,331-bp linear plasmid. The sequence has an average G+C content of 70.58% and contains six rRNA operons (16S-23S-5S) and 69 tRNA genes. The 8,616 predicted protein-coding sequences include 32 clusters coding for secondary metabolites, several of which are unique toS. davawensis . The chromosome contains long terminal inverted repeats of 33,255 bp each and atypical telomeres. Sequence analysis with regard to riboflavin biosynthesis revealed three different patterns of gene organization inStreptomyces species. Heterologous expression of a set of genes present on a subgenomic fragment ofS. davawensis resulted in the production of roseoflavin by the hostStreptomyces coelicolor M1152. Phylogenetic analysis revealed thatS. davawensis is a close relative ofStreptomyces cinnabarinus , and much to our surprise, we found that the latter bacterium is a roseoflavin producer as well.

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