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Conjugal Transfer of Polychlorinated Biphenyl/Biphenyl Degradation Genes in Acidovorax sp. Strain KKS102, Which Are Located on an Integrative and Conjugative Element
Author(s) -
Yoshiyuki Ohtsubo,
Yoko Ishibashi,
Hideaki Naganawa,
Satoshi Hirokawa,
Satomi Atobe,
Yuji Nagata,
Masataka Tsuda
Publication year - 2012
Publication title -
journal of bacteriology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.652
H-Index - 246
eISSN - 1067-8832
pISSN - 0021-9193
DOI - 10.1128/jb.00352-12
Subject(s) - biology , gammaproteobacteria , alphaproteobacteria , gene , biphenyl , strain (injury) , genetics , gene cluster , dna , integrase , 16s ribosomal rna , chemistry , organic chemistry , anatomy
A polychlorinated biphenyl (PCB)/biphenyl degradation gene cluster inAcidovorax sp. strain KKS102, which is very similar to that in Tn4371 fromCupriavidus oxalaticus A5, was transferred to several proteobacterial strains by conjugation. The mobilized DNA fragment consisted of 61,807 bp and carried genes for mating-pair formation (mpf ), DNA transfer (dtr ), integrase (int ), and replication-partition proteins (rep -parAB ). In the transconjugants, transferred DNA was integrated at ATTGCATCAG or similar sequences. The circular-form integrative and conjugative element (ICE) was detected by PCR, and quantitative PCR analyses revealed that, in KKS102 cells, the ratio of the circular form to the integrated form was very low (approximately 10−5 ). The circular form was not detected in a mutant of theint gene, which was located at the extreme left and transcribed in the inward direction, and the level ofint transcriptional activity was much higher in the circular form than in the integrated form. These findings clearly demonstrated that the genes for PCB/biphenyl degradation in KKS102 cells are located on an ICE, which was named ICEKKS102 4677 . Comparisons of similar ICE-like elements collected from the public database suggested that those of beta- and gammaproteobacteria were distinguishable from other ICE-like elements, including those in alphaproteobacteria, with respect to the gene composition and gene organization.

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