Differentiation of “ Candidatus Liberibacter asiaticus” Isolates by Variable-Number Tandem-Repeat Analysis | Zendy

Hiroshi Katoh | Zendy; Siti Subandiyah | Zendy; Kenta Tomimura | Zendy; Mitsuru Okuda | Zendy; HongJi Su | Zendy; Toru Iwanami | Zendy

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Differentiation of “ Candidatus Liberibacter asiaticus” Isolates by Variable-Number Tandem-Repeat Analysis

Author(s) -

Hiroshi Katoh,

Siti Subandiyah,

Kenta Tomimura,

Mitsuru Okuda,

HongJi Su,

Toru Iwanami

Publication year - 2011

Publication title -

applied and environmental microbiology

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 1.552

H-Index - 324

eISSN - 1070-6291

pISSN - 0099-2240

DOI - 10.1128/aem.01571-10

Subject(s) - biology , variable number tandem repeat , genetics , genetic diversity , microsatellite , sequence analysis , tandem repeat , genotype , allele , gene , genome , population , demography , sociology

Four highly polymorphic simple sequence repeat (SSR) loci were selected and used to differentiate 84 Japanese isolates of "Candidatus Liberibacter asiaticus." The Nei's measure of genetic diversity values for these four SSRs ranged from 0.60 to 0.86. The four SSR loci were also highly polymorphic in four isolates from Taiwan and 12 isolates from Indonesia.

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