Pyrobaculum yellowstonensis Strain WP30 Respires on Elemental Sulfur and/or Arsenate in Circumneutral Sulfidic Geothermal Sediments of Yellowstone National Park
Author(s) -
Zackary J. Jay,
Jacob P. Beam,
Alice Dohnálková,
Regina Lohmayer,
B. Bodle,
Britta PlanerFriedrich,
Margaret F. Romine,
William P. Inskeep
Publication year - 2015
Publication title -
applied and environmental microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.552
H-Index - 324
eISSN - 1070-6291
pISSN - 0099-2240
DOI - 10.1128/aem.01095-15
Subject(s) - arsenate , sulfur , crenarchaeota , archaea , sulfur metabolism , arsenite , environmental chemistry , biology , arsenic , chemistry , bacteria , biochemistry , genetics , organic chemistry
Thermoproteales (phylumCrenarchaeota ) populations are abundant in high-temperature (>70°C) environments of Yellowstone National Park (YNP) and are important in mediating the biogeochemical cycles of sulfur, arsenic, and carbon. The objectives of this study were to determine the specific physiological attributes of the isolatePyrobaculum yellowstonensis strain WP30, which was obtained from an elemental sulfur sediment (Joseph's Coat Hot Spring [JCHS], 80°C, pH 6.1, 135 μM As) and relate this organism to geochemical processes occurringin situ . Strain WP30 is a chemoorganoheterotroph and requires elemental sulfur and/or arsenate as an electron acceptor. Growth in the presence of elemental sulfur and arsenate resulted in the formation of thioarsenates and polysulfides. The complete genome of this organism was sequenced (1.99 Mb, 58% G+C content), revealing numerous metabolic pathways for the degradation of carbohydrates, amino acids, and lipids. Multiple dimethyl sulfoxide-molybdopterin (DMSO-MPT) oxidoreductase genes, which are implicated in the reduction of sulfur and arsenic, were identified. Pathways for thede novo synthesis of nearly all required cofactors and metabolites were identified. The comparative genomics ofP. yellowstonensis and the assembled metagenome sequence from JCHS showed that this organism is highly related (∼95% average nucleotide sequence identity) toin situ populations. The physiological attributes and metabolic capabilities ofP. yellowstonensis provide an important foundation for developing an understanding of the distribution and function of these populations in YNP.
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