Rapid Detection, by PCR and Reverse Hybridization, of Mutations in the Helicobacter pylori 23S rRNA Gene, Associated with Macrolide Resistance
Author(s) -
LeenJan van Doorn,
Y. J. Debets-Ossenkopp,
Armelle Marais,
Ricardo Sanna,
Françis Mégraud,
Johannes G. Kusters,
Wim Quint
Publication year - 1999
Publication title -
antimicrobial agents and chemotherapy
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.07
H-Index - 259
eISSN - 1070-6283
pISSN - 0066-4804
DOI - 10.1128/aac.43.7.1779
Subject(s) - 23s ribosomal rna , biology , helicobacter pylori , point mutation , microbiology and biotechnology , ribosomal rna , restriction fragment length polymorphism , gene , polymerase chain reaction , nucleic acid thermodynamics , dna , mutant , genetics , rna , ribosome
A PCR-based reverse hybridization system (research prototype kit INNO-LiPA for H. pylori resistance) was developed and evaluated for simultaneous detection of 23S ribosomal DNA point mutations, associated with macrolide resistance in Helicobacter pylori. Fifty-seven H. pylori strains (51 natural, 6 laboratory-derived artificial, 52 resistant, and 5 susceptible strains) were tested by PCR-LiPA (detecting mutations A2115-->G, G2141-->A, A2142-->G, A2142-->C, A2143-->G, A2143-->C, and A2143-->T), DNA sequencing, restriction fragment length polymorphism, and/or hybridization to oligonucleotide probes. Results were highly concordant, but PCR-LiPA appears to be more sensitive for the simultaneous detection of multiple mutants.
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